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[ DevCourseWeb.com ] Udemy - Bioinformatics; Learn Docking and Mol Dynamics Simulation
magnet:?xt=urn:btih:af5d6b0e702bbefa179120b3fafee6c6f68fd7d9&dn=[ DevCourseWeb.com ] Udemy - Bioinformatics; Learn Docking and Mol Dynamics Simulation
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Hash值:
af5d6b0e702bbefa179120b3fafee6c6f68fd7d9
点击数:
24
文件大小:
2.7 GB
文件数量:
111
创建日期:
2024-12-7 10:53
最后访问:
2024-12-25 22:48
访问标签:
DevCourseWeb
com
Udemy
-
Bioinformatics;
Learn
Docking
and
Mol
Dynamics
Simulation
文件列表详情
~Get Your Files Here !/01 - Important Massage Before Start of The Course/001 Important Massage from Instructors.mp4 4.26 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/001 What is Protein.mp4 51.3 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/002 Experimental Techniques to Determine 3D Structure of Protein.mp4 4.59 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/003 Practical-1 How To Download Protein Structure From Protein Databank.mp4 90 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/004 Practical-2 Visualization of 3D Structure of Protein Using Pymol.mp4 35.58 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/005 Fixing the Missing Residues in Protein 3D Structure Downloaded.mp4 16.03 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/006 Practical-3 Fixing Missing Residues Issue With Modeller.mp4 102.1 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/007 Intro to Protein 3D Structure Prediction.mp4 2.41 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/008 Modeller-access-in-MAC.mp4 9.45 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/008 Practical-4 How to Predict 3D Structure Using Modeller (Homology).mp4 259.72 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/009 Practical-5 How to Use I-TASSER for Prediction of 3D Structure.mp4 121.93 MB
~Get Your Files Here !/02 - (Optional) Module-1 Protein Structure Basics & Way to Get Them/010 Practical-6 Introduction of Alpha-Fold Database and Alpha-Fold Colab.mp4 28.86 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/001 Basic Introduction of Molecular Dynamic Simulations and its Steps.mp4 14.92 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/002 Basic Theory of Molecular Dynamics Simulation (Part-1).mp4 4.97 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/003 Basic Theory of Molecular Dynamics Simulation (Part-2).mp4 7.43 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/004 Basic Theory of Molecular Dynamics Simulation (Part-3).mp4 6.42 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/005 Basic Theory of Molecular Dynamics Simulation (Part-4).mp4 5.99 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/006 MD (Molecular Dynamics Simulation) Cycle.mp4 7.9 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/007 Basic Steps of Molecular Dynamics Simulations.mp4 1.62 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/008 Protein Structure Preparation for Molecular Dynamics Simulations.mp4 8.18 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/009 Preparation of Topology File for Molecular Dynamics Simulations.mp4 5.29 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/010 Solvation and Ionization of System.mp4 20.04 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/011 Energy Minimization (EM) of System.mp4 2.74 MB
~Get Your Files Here !/03 - Module-2 Theory of Molecular Dynamics Simulations/012 Equilibration and Production Phase of Molecular Dynamics Simulation.mp4 16.74 MB
~Get Your Files Here !/04 - Module 3 Computer Operating System Used for Molecular Dynamics Simulation/001 Basic Type of Operating System Available in Market.mp4 4.17 MB
~Get Your Files Here !/04 - Module 3 Computer Operating System Used for Molecular Dynamics Simulation/002 Features of Linux Operating System.mp4 4.77 MB
~Get Your Files Here !/04 - Module 3 Computer Operating System Used for Molecular Dynamics Simulation/003 Terminal of Linux Operating System.mp4 1.5 MB
~Get Your Files Here !/04 - Module 3 Computer Operating System Used for Molecular Dynamics Simulation/004 Some Basic Commands for Linux Operating System.mp4 26.76 MB
~Get Your Files Here !/04 - Module 3 Computer Operating System Used for Molecular Dynamics Simulation/005 What's Next.mp4 4.23 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/001 Practical-7 Installation of Linux in Windows Environment.mp4 30.3 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/002 Practical-8 Installation of GROMACS.mp4 42.05 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/003 Modules of GROMACS Used in Molecular Dynamics Tutorial.mp4 4.48 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/004 Work Flow of Molecular Dynamics in GROMACS.mp4 15.05 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/005 Practical-9 Creating Folder in Ubuntu For Molecular Dynamics Simulations.mp4 19.35 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/006 Commands to Run Molecular Dynamics Simulations (For You).mp4 3.61 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/007 Practical-10 Cleaning Protein Structure For Molecular Dynamics Simulations.mp4 16.6 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/008 Practical-11 Creation of Topology File In GROMACS.mp4 49.44 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/009 Practical-12 Solvation of Step in Molecular Dynamics Simulation.mp4 41.12 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/010 Practical-13 Ionization Step in Molecular Dynamics Simulation.mp4 34 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/011 Practical-14 Energy Minimization (EM) in GROMACS.mp4 48.54 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/012 Practical-15 Equilibration Phase-I (Part-A).mp4 21.92 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/013 Practical-16 Equilibration Phase-I (Part-B).mp4 14.98 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/014 Practical-17 Equilibration Phase-II (Part-A).mp4 24.25 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/015 Practical-18 Equilibration Phase-II (Part-B).mp4 14.56 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/016 Understanding md.mdp File Before Final Phase.mp4 12.72 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/017 Practical-19 Running Molecular Dynamics Simulation Final Phase.mp4 13.46 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/018 Basic Theory of Molecular Dynamics Simulation Data Analysis.mp4 14.28 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/019 Commands for Analysis of Molecular Dynamics Simulation Data.mp4 7.55 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/020 Bringing the Protein in Center Before Data Analysis.mp4 8.1 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/021 Practical-20 Calculation of RMSD.mp4 11.45 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/022 Practical-21 Calculation of RMSF.mp4 10.84 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/023 Practical-22 Calculation of Radius of Gyration (Rg).mp4 9.63 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/024 Practical-23 Calculation of Total Number of Hydrogen bonds (Hb).mp4 6.78 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/025 Practical-24 Calculation of Solvent Accessible Surface Area (SASA).mp4 22.56 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/026 Practical-25 Opening of XVG Files in Excel.mp4 40.65 MB
~Get Your Files Here !/05 - Module 4 Demonstration of MD Simulation of Protein in Water with GROMACS/027 Practical-25.1 Visualization of MD Trajectory in Pymol.mp4 36.54 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/001 Introduction of Docking-Part-1.mp4 3.19 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/002 Introduction of Docking-Part-2.mp4 3 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/003 Sampling Algorithms-Part-1.mp4 1.91 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/004 Sampling Algorithms-Part-2.mp4 1.65 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/005 Sampling Algorithms-Part-3.mp4 16.36 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/006 Sampling Algorithms-Part-4.mp4 7.88 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/007 Scoring Algorithms.mp4 5.68 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/008 Types of Docking.mp4 2.81 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/009 Basic Steps in Docking Protocol.mp4 7.99 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/010 Theory of Docking Steps-Part-1.mp4 7.04 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/011 Theory of Docking Steps-Part-2.mp4 5.62 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/012 Practical-26 Installation of MGL Tools, Vina, AutoDock4 & Autogrid.mp4 22.95 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/013 Practical-27 Installation of Ligand Drawing Tools.mp4 12.66 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/014 Practical-28 Downloading and Preparation of Protein 3D Structure for Docking.mp4 67.57 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/015 Issue With Protein Structure Preparation in MGL Tools.mp4 6.93 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/016 Practical-29 Downloading of Ligand 3D Structure from ZINC Database.mp4 33.43 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/017 Practical-30 Drawing of Ligand Structure in ChemSketch.mp4 62.18 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/018 Practical-31 Preparation of Ligand Molecule for Docking.mp4 54.51 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/019 Practical-32 Prediction of Active Site of Protein.mp4 38.15 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/020 Practical-33 Setting Grid.mp4 50.07 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/021 Very Important Step; Be Careful Here.mp4 15.78 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/022 Practical-34 (Part-A) Performing Docking with Vina.mp4 29.67 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/023 Practical-34 (Part-B) Visualization of Vina Docking Data.mp4 24.59 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/024 Practical-35 (Part-A) Performing Docking Using AutoDock4.mp4 83.01 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/025 Practical-35 (Part-B) Visualization of AutoDock4 Docking Results.mp4 21.08 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/026 Practical-33 Preforming Docking with CB Dock.mp4 26.43 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/027 Practical-34 Analyzing the Docking Data.mp4 60.91 MB
~Get Your Files Here !/06 - Module-5 Fundamentals of Molecular Docking (Theory & Practical)/028 Practical-35 PatchDock; Shape Complementary Docking Program.mp4 80.05 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/001 Biggest Drawback of Conventional Docking Protocol.mp4 5.06 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/002 Difference Between Simple MD Simulation Vs Protein-Ligand MD Simulations.mp4 1.37 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/003 Basic Steps of Protein-Ligand MD Simulations.mp4 3.31 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/004 Practical-36 Very First Step; Preparation of Protein and Ligand.mp4 29.94 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/005 Practical-37 Necessary Files Needed For Molecular Dynamics Simulations.mp4 9.15 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/006 Commands to Run Ligand-Protein Molecular Dynamics Simulations.mp4 2.97 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/007 Practical-38 Preparation of Protein Topology File.mp4 31.66 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/008 Practical-39 Preparation of Ligand Topology File.mp4 35.56 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/009 Practical-40 Making Complex.mp4 40.89 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/010 Practical-41 Solvation, Ionization & Energy Minimization of Complex.mp4 18.93 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/011 Practical-42 Ligand Restrain.mp4 31.45 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/012 Practical-43 Thermostats.mp4 8.44 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/013 Practical-44 Equilibration.mp4 22.38 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/014 Practical-44 Production Phase.mp4 18.79 MB
~Get Your Files Here !/07 - Module-6 Molecular Dynamics Simulations of Protein-Ligand Docked Complex/015 Practical-44 Analysis.mp4 59.73 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/001 Importance of Virtual Screening.mp4 23.26 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/002 Introduction to Virtual Screening.mp4 16.96 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/003 Fundamental Steps of Virtual Screening.mp4 6.5 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/004 Commands Needed to Run Virtual Screening.mp4 1.59 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/005 Practical-46 Installation of Open Babel and Auto-Dock Vina In Linux (Ubuntu).mp4 24.99 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/006 Practical-47 Preparation of Protein Receptor for Virtual Screening.mp4 11.24 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/007 Practical-48 Downloading of Thousands of Ligands in One Click.mp4 43.14 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/008 Practical-49 Preparation of Ligands for Docking.mp4 24.93 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/009 Practical-50 Setting Grid and Writing of Configuration File.mp4 7.22 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/010 Practical-51 Docking of Ligands with Receptors in Vina.mp4 27.83 MB
~Get Your Files Here !/08 - Module-7 Virtual Screening of Drugs/011 Practical-52 Analysis.mp4 11.95 MB
~Get Your Files Here !/09 - Recent Updates in Structural Biology For MD and Docking/001 Protein Databank Update.mp4 46.14 MB
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